BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036E01SP1|AL430233
(938 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1626 835 0.0
3x_Contig866 116 6e-26
3x_Contig1183 114 3e-25
>3x_Contig1626
Length = 17698
Score = 835 bits (409), Expect = 0.0
Identities = 459/479 (95%)
Strand = Plus / Minus
Query: 455 cggaggaacaaaaaaaccaaaraacaaaaaaaaaaggaacaaragmgaraaaaaaaaggg 514
||||||| ||| || ||| || | |||| ||||||||||||| || || | | || |||
Sbjct: 2768 cggaggatcaataatacctaagatcaaataaaaaaggaacaagagcgagattataatggg 2709
Query: 515 aaaaaatcgtggatccgacgataaagattacaagggagaaaacgaatctstcgcctttcc 574
| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2708 tttatatcgtggatccgacgataaagattacaagggagaaaacgaatctgtcgcctttcc 2649
Query: 575 aggcgaggtttgggaaggattgctatccagtggtgtagtgcatgatgtgttacagggtct 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2648 aggcgaggtttgggaaggattgctatccagtggtgtagtgcatgatgtgttacagggtct 2589
Query: 635 tggattccctggtggatgggcatggaatatcgataaattggtcgatgatgtgaataacgg 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2588 tggattccctggtggatgggcatggaatatcgataaattggtcgatgatgtgaataacgg 2529
Query: 695 aatcactaccaggacaaagactcccagcgtagaacaattttcgaaatgtaacgagttgaa 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2528 aatcactaccaggacaaagactcccagcgtagaacaattttcgaaatgtaacgagttgaa 2469
Query: 755 gggtgtttctgtgtgggatacaagaggcctttggagatgtcttttcccccagtcggtagt 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2468 gggtgtttctgtgtgggatacaagaggcctttggagatgtcttttcccccagtcggtagt 2409
Query: 815 tcagaatggtggtctctcgagagaggccgttgaagctgacaaagaccataagctaggtct 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2408 tcagaatggtggtctctcgagagaggccgttgaagctgacaaagaccataagctaggtct 2349
Query: 875 tttcttccctgagtattctgggtttttgtcgtggagagctcacatgatggcattggcga 933
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2348 tgtcttccctgagtattctgggtttttgtcgtggagagctcacatgatggcattggcga 2290
>3x_Contig866
Length = 4028
Score = 116 bits (57), Expect = 6e-26
Identities = 140/173 (80%), Gaps = 1/173 (0%)
Strand = Plus / Plus
Query: 275 aaaaaaaacagaaaaaaaaaaaaaaamaaamaaaamaaaaamccaaaaaaaaaaaaaaaa 334
|||||||||| ||||||||||||||| ||| |||| ||||| ||||||||||||||||
Sbjct: 144 aaaaaaaaca-aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa 202
Query: 335 aaacgaaaaagamcaaaagaaaaaaaaaaaagaacgcaamaaaaaagaagtggaaaaaaa 394
|||| ||||| | |||| |||||||||||| || || |||||| || |||||||
Sbjct: 203 aaacaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa 262
Query: 395 gaaccaagacaaaaargaaaaaaaaagaaaaaaaaaaaaaaraaamaaaaraa 447
|| || | ||||| ||||||||| |||||||||||||| ||| |||| ||
Sbjct: 263 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa 315
Score = 116 bits (57), Expect = 6e-26
Identities = 139/173 (80%)
Strand = Plus / Plus
Query: 275 aaaaaaaacagaaaaaaaaaaaaaaamaaamaaaamaaaaamccaaaaaaaaaaaaaaaa 334
|||||||| | ||||||||||||||| ||| |||| ||||| | ||||||||||||||||
Sbjct: 164 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacaaaaaaaaaaaaaaaaa 223
Query: 335 aaacgaaaaagamcaaaagaaaaaaaaaaaagaacgcaamaaaaaagaagtggaaaaaaa 394
||| ||||| | |||| |||||||||||| || || |||||| || |||||||
Sbjct: 224 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa 283
Query: 395 gaaccaagacaaaaargaaaaaaaaagaaaaaaaaaaaaaaraaamaaaaraa 447
|| || | ||||| ||||||||| |||||||||||||| ||| |||| ||
Sbjct: 284 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa 336
>3x_Contig1183
Length = 3176
Score = 114 bits (56), Expect = 3e-25
Identities = 137/170 (80%)
Strand = Plus / Plus
Query: 275 aaaaaaaacagaaaaaaaaaaaaaaamaaamaaaamaaaaamccaaaaaaaaaaaaaaaa 334
|||||||| | ||||||||||||||| ||| |||| ||||| ||||||||||||||||
Sbjct: 125 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa 184
Query: 335 aaacgaaaaagamcaaaagaaaaaaaaaaaagaacgcaamaaaaaagaagtggaaaaaaa 394
||| ||||| | |||| |||||||||||| || || |||||| || | |||||||
Sbjct: 185 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaataaaaaaaaa 244
Query: 395 gaaccaagacaaaaargaaaaaaaaagaaaaaaaaaaaaaaraaamaaaa 444
||| || | ||||| ||||||||| |||||||||||||| | | ||||
Sbjct: 245 aaacaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacacaaaa 294
Score = 108 bits (53), Expect = 2e-23
Identities = 138/173 (79%), Gaps = 5/173 (2%)
Strand = Plus / Plus
Query: 275 aaaaaaaacagaaaaaaaaaaaaaaamaaamaaaamaaaaamccaaaaaaaaaaaaaaaa 334
|||||||| | ||||||||||||||| ||| |||| ||||| |||||||||||||||||
Sbjct: 429 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacaaaaaaaaaaaaaaaa 488
Query: 335 aaacgaaaaagamcaaaagaaaaaaaaaaaagaacgcaamaaaaaagaagtggaaaaaaa 394
||| ||||| | |||| |||||||||||| || || |||||| | |||||||
Sbjct: 489 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa-----aaaaaaa 543
Query: 395 gaaccaagacaaaaargaaaaaaaaagaaaaaaaaaaaaaaraaamaaaaraa 447
|| || | ||||| ||||||||| |||||||||||||| ||| |||| ||
Sbjct: 544 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacaaaaaaa 596
Score = 100 bits (49), Expect = 5e-21
Identities = 78/91 (85%)
Strand = Plus / Plus
Query: 275 aaaaaaaacagaaaaaaaaaaaaaaamaaamaaaamaaaaamccaaaaaaaaaaaaaaaa 334
|||||||||| ||||||||||||||| ||| |||| ||||| ||||||||||||||||
Sbjct: 464 aaaaaaaacaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa 523
Query: 335 aaacgaaaaagamcaaaagaaaaaaaaaaaa 365
||| ||||| | |||| ||||||||||||
Sbjct: 524 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa 554
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.717 1.34
Gapped
Lambda K H
1.42 0.717 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 44,504
Number of Sequences: 1807
Number of extensions: 44504
Number of successful extensions: 13004
Number of sequences better than 1.0e-20: 3
length of query: 938
length of database: 10,358,551
effective HSP length: 16
effective length of query: 922
effective length of database: 10,329,639
effective search space: 9523927158
effective search space used: 9523927158
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.6 bits)
S1: 12 (25.0 bits)
S2: 49 (100.5 bits)